Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus assembly protein pilw | SAMN05192549_104408 | Not Available | Positive | 2554862 - 2556076 | 42304.1 |
| tfp pilus assembly protein pilx | SAMN05192549_104409 | Not Available | Positive | 2556073 - 2556663 | 21024.7 |
| type iv pilus assembly protein pily1 | SAMN05192549_104410 | Not Available | Positive | 2556673 - 2561229 | 159438.0 |
| peptide chain release factor 3 | SAMN05192549_104411 | Not Available | Positive | 2561275 - 2562939 | 61675.9 |
| broad specificity phosphatase phoe | SAMN05192549_104412 | Not Available | Negative | 2563038 - 2563802 | 28539.0 |
| exodeoxyribonuclease-3 | SAMN05192549_104413 | Not Available | Negative | 2563802 - 2564587 | 29622.5 |
| gntr family transcriptional regulator | SAMN05192549_104414 | Not Available | Positive | 2564785 - 2565183 | 14271.6 |
| abc-2 type transport system atp-binding protein | SAMN05192549_104415 | Not Available | Positive | 2565180 - 2565899 | 26224.8 |
| hypothetical protein | SAMN05192549_104416 | Not Available | Positive | 2565896 - 2567326 | 52109.3 |
| hypothetical protein | SAMN05192549_104417 | Not Available | Negative | 2567323 - 2568030 | 24968.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
