Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted atpase | SAMN05192549_104367 | Not Available | Negative | 2512809 - 2513564 | 28400.7 |
| type vi secretion system protein impa | SAMN05192549_104368 | Not Available | Negative | 2513561 - 2514619 | 37704.6 |
| ompa-ompf porin, oop family | SAMN05192549_104369 | Not Available | Negative | 2514642 - 2515406 | 26839.0 |
| type vi secretion system protein impm | SAMN05192549_104370 | Not Available | Negative | 2515410 - 2516396 | 35664.9 |
| type vi secretion system protein impl | SAMN05192549_104371 | Not Available | Negative | 2516393 - 2520337 | 144521.0 |
| hypothetical protein | SAMN05192549_104372 | Not Available | Negative | 2520363 - 2521808 | 50556.6 |
| peptidoglycan l-alanyl-d-glutamate endopeptidase cwlk | SAMN05192549_104373 | Not Available | Negative | 2521808 - 2522659 | 31308.3 |
| hypothetical protein | SAMN05192549_104374 | Not Available | Positive | 2522811 - 2523584 | 26533.5 |
| rhs element vgr protein | SAMN05192549_104375 | Not Available | Positive | 2523581 - 2526457 | 100371.0 |
| protein of unknown function | SAMN05192549_104376 | Not Available | Positive | 2526460 - 2527284 | 30670.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
