Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05192549_104347 | Not Available | Positive | 2487910 - 2489655 | 62387.3 |
| transglutaminase-like superfamily protein | SAMN05192549_104348 | Not Available | Positive | 2489676 - 2492057 | 88441.2 |
| probable extracellular repeat, haf family | SAMN05192549_104349 | Not Available | Negative | 2492041 - 2493081 | 36267.8 |
| hypothetical protein | SAMN05192549_104350 | Not Available | Negative | 2493556 - 2493951 | 14645.6 |
| hypothetical protein | SAMN05192549_104351 | Not Available | Negative | 2493948 - 2494397 | 16484.0 |
| hypothetical protein | SAMN05192549_104352 | Not Available | Negative | 2494898 - 2495560 | 23511.3 |
| hypothetical protein | SAMN05192549_104353 | Not Available | Negative | 2495573 - 2496403 | 28829.9 |
| type vi secretion system secreted protein vgrg | SAMN05192549_104354 | Not Available | Negative | 2496407 - 2499169 | 98390.6 |
| type vi secretion system protein impk | SAMN05192549_104355 | Not Available | Negative | 2499170 - 2499934 | 28139.9 |
| type vi secretion system protein impj | SAMN05192549_104356 | Not Available | Negative | 2499946 - 2501271 | 49465.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
