Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux pump | SAMN05192549_104157 | Not Available | Positive | 2290951 - 2294025 | 109956.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05192549_104158 | Not Available | Positive | 2294034 - 2295071 | 38083.6 |
| predicted methyltransferase regulatory domain-containing protein | SAMN05192549_104159 | Not Available | Negative | 2295048 - 2296583 | 56903.4 |
| uncharacterized membrane protein | SAMN05192549_104160 | Not Available | Negative | 2296684 - 2297259 | 20611.8 |
| maoc like domain-containing protein | SAMN05192549_104161 | Not Available | Negative | 2297341 - 2298225 | 32203.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN05192549_104162 | Not Available | Negative | 2298222 - 2299628 | 49687.5 |
| iron complex outermembrane recepter protein | SAMN05192549_104163 | Not Available | Negative | 2299629 - 2302022 | 86497.5 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05192549_104164 | Not Available | Negative | 2302019 - 2303206 | 44665.4 |
| caax protease self-immunity | SAMN05192549_104165 | Not Available | Negative | 2303358 - 2304050 | 25279.7 |
| peroxiredoxin | SAMN05192549_104166 | Not Available | Negative | 2304139 - 2304648 | 18406.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
