Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05192549_104127 | Not Available | Negative | 2253684 - 2254838 | 42832.2 |
| hypothetical protein | SAMN05192549_104128 | Not Available | Positive | 2255028 - 2255534 | 17828.9 |
| cyanophycin synthetase | SAMN05192549_104129 | Not Available | Positive | 2255531 - 2257381 | 64909.4 |
| l-asparaginase/beta-aspartyl-peptidase (threonine type) | SAMN05192549_104130 | Not Available | Negative | 2257378 - 2258160 | 26140.2 |
| cyanophycin synthetase | SAMN05192549_104131 | Not Available | Negative | 2258163 - 2260817 | 93867.2 |
| cyanophycinase | SAMN05192549_104132 | Not Available | Negative | 2260821 - 2261633 | 28924.8 |
| iron-containing redox enzyme | SAMN05192549_104133 | Not Available | Negative | 2261642 - 2263126 | 54843.1 |
| small-conductance mechanosensitive channel | SAMN05192549_104134 | Not Available | Negative | 2263255 - 2264376 | 41268.4 |
| pas domain s-box-containing protein | SAMN05192549_104135 | Not Available | Positive | 2264607 - 2266136 | 55879.4 |
| dna-binding transcriptional regulator, marr family | SAMN05192549_104136 | Not Available | Negative | 2266141 - 2266605 | 16958.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
