Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conserved hypothetical protein, pp_1857 family | SAMN05192549_1047 | Not Available | Positive | 2129647 - 2130783 | 42005.1 |
| elongation factor p | SAMN05192549_1048 | Not Available | Positive | 2130908 - 2131483 | 21750.9 |
| amidase | SAMN05192549_1049 | Not Available | Positive | 2131623 - 2133221 | 55952.7 |
| hypothetical protein | SAMN05192549_10410 | Not Available | Negative | 2133211 - 2133912 | 25338.3 |
| hypothetical protein | SAMN05192549_10411 | Not Available | Negative | 2133928 - 2134590 | 24678.0 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05192549_10412 | Not Available | Positive | 2134765 - 2135937 | 42474.3 |
| peptide-methionine (s)-s-oxide reductase | SAMN05192549_10413 | Not Available | Negative | 2135934 - 2136632 | 24873.2 |
| cytochrome c biogenesis protein ccda | SAMN05192549_10414 | Not Available | Negative | 2136647 - 2138455 | 63690.9 |
| peptide-methionine (r)-s-oxide reductase | SAMN05192549_10415 | Not Available | Negative | 2138471 - 2138956 | 17533.7 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05192549_10416 | Not Available | Positive | 2139080 - 2139799 | 26726.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
