Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad+ diphosphatase | SAMN05192549_103454 | Not Available | Positive | 2074022 - 2074837 | 30396.5 |
| gtp cyclohydrolase i | SAMN05192549_103455 | Not Available | Positive | 2074902 - 2075465 | 21194.6 |
| thioredoxin-like | SAMN05192549_103456 | Not Available | Positive | 2075471 - 2076790 | 46595.7 |
| zn-dependent amino-or carboxypeptidase, m28 family | SAMN05192549_103457 | Not Available | Negative | 2076803 - 2078398 | 58107.1 |
| protein of unknown function | SAMN05192549_103458 | Not Available | Positive | 2078598 - 2078885 | 9939.76 |
| methyl-accepting chemotaxis sensory transducer with cache sensor | SAMN05192549_103459 | Not Available | Positive | 2079054 - 2080691 | 58223.0 |
| hypothetical protein | SAMN05192549_103460 | Not Available | Negative | 2080758 - 2081189 | 15870.0 |
| outer membrane protein | SAMN05192549_103461 | Not Available | Negative | 2081257 - 2081865 | 21701.1 |
| pre-peptidase c-terminal domain-containing protein | SAMN05192549_103462 | Not Available | Positive | 2082058 - 2085459 | 118496.0 |
| abc-type amino acid transport substrate-binding protein | SAMN05192549_103463 | Not Available | Negative | 2085477 - 2086202 | 26756.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
