Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Duganella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Duganella |
| Species | Duganella sacchari |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | rhizosphere of sugar cane |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1284171 bp
Thymine Count
1286044 bp
Guanine Count
2052384 bp
Cytosine Count
2052882 bp
Genome Length
6675676 bp
Protein-coding Genes
5864 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dj-1/pfpi family protein | SAMN05192549_103414 | Not Available | Negative | 2006089 - 2006691 | 21783.0 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN05192549_103415 | Not Available | Positive | 2006708 - 2007742 | 36216.6 |
| hypothetical protein | SAMN05192549_103416 | Not Available | Positive | 2007745 - 2008137 | 13902.6 |
| hypothetical protein | SAMN05192549_103417 | Not Available | Positive | 2008631 - 2015869 | 233816.0 |
| hypothetical protein | SAMN05192549_103418 | Not Available | Positive | 2016285 - 2024213 | 261858.0 |
| atp-binding cassette, subfamily b | SAMN05192549_103419 | Not Available | Positive | 2024404 - 2026554 | 78960.8 |
| hlyd family secretion protein | SAMN05192549_103420 | Not Available | Positive | 2026527 - 2027894 | 50601.0 |
| glycosyltransferase, gt2 family | SAMN05192549_103421 | Not Available | Positive | 2027912 - 2028697 | 29635.7 |
| nucleoside-diphosphate-sugar epimerase | SAMN05192549_103422 | Not Available | Negative | 2028760 - 2029650 | 32538.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05192549_103423 | Not Available | Negative | 2029647 - 2030213 | 20664.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
