Duganella sacchari

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Duganella

Description

Duganella sacchari is a Gram-negative, rod-shaped bacterium that exhibits aerobic metabolism and is non-spore-forming. This microbe thrives optimally at a temperature of 29.0°C, indicating its potential adaptation to mesophilic environments. As a member of the diverse microbial community, Duganella sacchari may play a significant role in various ecological niches, particularly in environments where organic matter, such as sugars, is abundant. The aerobic nature of this bacterium implies its reliance on oxygen for respiration, which may influence its distribution and interactions within microbial ecosystems. Given its morphological and physiological traits, Duganella sacchari could be involved in the degradation of organic materials, contributing to nutrient cycling in its habitat. This trait suggests that it may participate in processes such as the breakdown of plant-derived polysaccharides, which could be particularly relevant in agricultural or soil ecosystems. Understanding the specific ecological roles and interactions of Duganella sacchari remains an area for further research, particularly in the context of microbial community dynamics and its potential applications in bioremediation or agriculture.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusDuganella
SpeciesDuganella sacchari
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Duganella sacchari
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
Habitatrhizosphere of sugar cane
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Duganella sacchari strain Sac-22 genome assembly, contig:

Gene Summary

Adenine Count

1284171 bp

Thymine Count

1286044 bp

Guanine Count

2052384 bp

Cytosine Count

2052882 bp

Genome Length

6675676 bp

Protein-coding Genes

5864 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pep-cterm protein-sorting domain-containing proteinSAMN05192549_102310Not AvailablePositive1242797 - 124334819424.4
hypothetical proteinSAMN05192549_102311Not AvailablePositive1243871 - 124435616476.7
muramoyltetrapeptide carboxypeptidaseSAMN05192549_102312Not AvailableNegative1244357 - 124527733672.5
proline iminopeptidaseSAMN05192549_102313Not AvailableNegative1245288 - 124623533754.4
trna(adenine34) deaminaseSAMN05192549_102314Not AvailableNegative1246295 - 124678017094.7
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthaseSAMN05192549_102315Not AvailableNegative1246770 - 124721916923.3
7-carboxy-7-deazaguanine synthase, cx14cxxc typeSAMN05192549_102316Not AvailableNegative1247220 - 124785523213.8
histidine kinase-, dna gyrase b-, and hsp90-like atpaseSAMN05192549_102317Not AvailablePositive1248016 - 124878027816.6
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05192549_102318Not AvailablePositive1248798 - 124979336836.9
peptidase m10 serralysin c terminalSAMN05192549_102319Not AvailableNegative1249794 - 125150659886.3

Displaying genes 1111 – 1120 of 5947 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.