Hafnia paralvei

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia paralvei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Hafnia paralvei
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbeef trim
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia paralvei strain PCM_1194 993, whole genome shotgun

Gene Summary

Adenine Count

1235500 bp

Thymine Count

1254402 bp

Guanine Count

1172405 bp

Cytosine Count

1147581 bp

Genome Length

4810955 bp

Protein-coding Genes

4178 genes

Non-Coding Genes

206 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type vi secretion system contractile sheath large subunitEYY89_01035Not AvailablePositive227312 - 22879655973.2
type vi secretion system baseplate subunit tsseEYY89_01040Not AvailablePositive228800 - 22922815822.6
type vi secretion system baseplate subunit tssfEYY89_01045Not AvailablePositive229241 - 23098666883.8
hypothetical proteinEYY89_01055Not AvailablePositive231670 - 23273440874.9
hypothetical proteinEYY89_01060Not AvailablePositive233170 - 23423441041.1
reactive intermediate/imine deaminaseEYY89_01065Not AvailablePositive234599 - 23587045355.5
hcp family type vi secretion system effectorEYY89_01070Not AvailablePositive236185 - 23670319110.6
1-deoxy-d-xylulose-5-phosphate synthaseEYY89_01075Not AvailableNegative236789 - 23865467450.4
(2e,6e)-farnesyl diphosphate synthaseEYY89_01080Not AvailableNegative238838 - 23974332471.9
exodeoxyribonuclease vii small subunitEYY89_01085Not AvailableNegative239746 - 2400039415.0

Displaying genes 341 – 350 of 4384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.