Hafnia paralvei

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia paralvei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Hafnia paralvei
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbeef trim
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia paralvei strain PCM_1194 993, whole genome shotgun

Gene Summary

Adenine Count

1235500 bp

Thymine Count

1254402 bp

Guanine Count

1172405 bp

Cytosine Count

1147581 bp

Genome Length

4810955 bp

Protein-coding Genes

4178 genes

Non-Coding Genes

206 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxyphenylacetate permeaseEYY89_00775Not AvailableNegative169061 - 17043750548.3
4-hydroxy-2-oxoheptanedioate aldolaseEYY89_00780Not AvailableNegative170461 - 17127328817.6
2-oxo-hepta-3-ene-1,7-dioic acid hydrataseEYY89_00785Not AvailableNegative171284 - 17208729565.4
nad-dependent succinate-semialdehyde dehydrogenaseEYY89_00790Not AvailableNegative172113 - 17359152604.9
5-carboxymethyl-2-hydroxymuconate delta-isomeraseEYY89_00795Not AvailableNegative173679 - 17406214484.4
3,4-dihydroxyphenylacetate 2,3-dioxygenaseEYY89_00800Not AvailableNegative174072 - 17492932142.2
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenaseEYY89_00805Not AvailableNegative174998 - 17646453373.1
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseEYY89_00810Not AvailableNegative176461 - 17722528616.0
2-hydroxyhepta-2,4-diene-1,7-dioate isomeraseEYY89_00815Not AvailableNegative177222 - 17786622970.4
homoprotocatechuate degradation operon regulator hparEYY89_00820Not AvailablePositive178238 - 17867816671.2

Displaying genes 291 – 300 of 4384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.