Hafnia paralvei

Gram-negativeRod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Hafniaceae

Genus

Hafnia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyHafniaceae
GenusHafnia
SpeciesHafnia paralvei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Hafnia paralvei
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatbeef trim
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Hafnia paralvei strain PCM_1194 993, whole genome shotgun

Gene Summary

Adenine Count

1235500 bp

Thymine Count

1254402 bp

Guanine Count

1172405 bp

Cytosine Count

1147581 bp

Genome Length

4810955 bp

Protein-coding Genes

4178 genes

Non-Coding Genes

206 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
soxr-reducing system protein rsecEYY89_09875Not AvailableNegative2086228 - 208669216502.1
sigma-e factor regulatory protein rsebEYY89_09880Not AvailableNegative2086689 - 208765135979.9
anti-sigma-e factor rseaEYY89_09885Not AvailableNegative2087651 - 208832524557.8
rna polymerase sigma factor rpoeEYY89_09890Not AvailableNegative2088325 - 208890021658.9
l-aspartate oxidaseEYY89_09895Not AvailablePositive2089079 - 209071661265.3
branched-chain amino acid transport system ii carrier proteinEYY89_09900Not AvailableNegative2090799 - 209217848509.3
trna1(val) (adenine(37)-n6)-methyltransferaseEYY89_09905Not AvailableNegative2092434 - 209318327999.2
atp-dependent rna helicase srmbEYY89_09910Not AvailablePositive2093333 - 209466150147.5
autonomous glycyl radical cofactor grcaEYY89_09915Not AvailableNegative2094967 - 209535014417.2
uracil-dna glycosylaseEYY89_09920Not AvailablePositive2095731 - 209642625904.8

Displaying genes 1981 – 1990 of 4384 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.