Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Hafniaceae
Genus
Hafnia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Hafniaceae |
| Genus | Hafnia |
| Species | Hafnia paralvei |
| Strain | CITHA-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | beef trim |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4211 genes
Non-Coding Genes
357 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4150 domain-containing protein | CJD50_06475 | Not Available | Negative | 1391440 - 1392603 | 42939.2 |
| duf2169 domain-containing protein | CJD50_06480 | Not Available | Negative | 1392596 - 1393537 | 36055.6 |
| type vi secretion system tip protein vgrg | CJD50_06485 | Not Available | Negative | 1393547 - 1395487 | 72454.9 |
| type vi secretion system tube protein hcp | CJD50_06490 | Not Available | Negative | 1395706 - 1396224 | 19276.8 |
| type vi secretion system contractile sheath small subunit | CJD50_06495 | Not Available | Positive | 1396949 - 1397455 | 18137.9 |
| type vi secretion system contractile sheath large subunit | CJD50_06500 | Not Available | Positive | 1397475 - 1398962 | 55784.8 |
| type vi secretion system baseplate subunit tsse | CJD50_06505 | Not Available | Positive | 1398965 - 1399387 | 15958.1 |
| type vi secretion system baseplate subunit tssf | CJD50_06510 | Not Available | Positive | 1399393 - 1401225 | 69936.7 |
| type vi secretion system baseplate subunit tssg | CJD50_06515 | Not Available | Positive | 1401192 - 1402238 | 39424.2 |
| type vi secretion system-associated fha domain protein tagh | CJD50_06520 | Not Available | Positive | 1402255 - 1403541 | 47064.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
