Neisseria cinerea ATCC 14685

Gram-negativeAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Neisseriales

Family

Neisseriaceae

Genus

Neisseria

Description

Neisseria cinerea ATCC 14685 is a gram-negative, diplococcal bacterium that thrives best at human body temperature (approximately 37°C). As a heterotroph, it derives its nutrients from organic carbon sources found in its environment. This versatile microbe is classified as a facultative anaerobe, meaning it can grow in both aerobic and anaerobic conditions. This organism is part of the Neisseria genus, which includes several important human pathogens, but Neisseria cinerea is generally considered a commensal organism. It commonly colonizes mucosal surfaces, particularly in the nasopharynx and oropharynx, and has been found in the urogenital tract as well. While primarily associated with healthy individuals, it can occasionally be isolated from clinical specimens, although its role in disease remains unclear. The gram-negative nature of N. cinerea is indicative of its cell wall structure, characterized by a thin peptidoglycan layer surrounded by an outer membrane containing lipopolysaccharides. This structural feature contributes to its resistance against certain antibiotics and makes it a subject of study concerning the mechanisms of microbial resistance. Furthermore, its diplococcal shape enhances its survival and adaptability, allowing it to form pairs and clusters, which can facilitate communication and nutrient exchange in diverse environments. Research has revealed that N. cinerea can share genetic material with pathogenic Neisseria species through horizontal gene transfer, raising questions about its potential to acquire virulence factors. The ability of N. cinerea to coexist with more virulent bacteria in the same ecological niche underscores the complex dynamics of microbial communities in humans and the importance of understanding the role of commensals in health and disease.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderNeisseriales
FamilyNeisseriaceae
GenusNeisseria
SpeciesNeisseria cinerea
StrainATCC 14685

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Neisseria cinerea ATCC 14685
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neisseria cinerea ATCC 14685


Gene Summary

Adenine Count

462643 bp

Thymine Count

458536 bp

Guanine Count

470066 bp

Cytosine Count

481528 bp

Genome Length

1872773 bp

Protein-coding Genes

2127 genes

Non-Coding Genes

64 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinNEICINOT_03000Not Available-77 - 57718263.5
hypothetical proteinNEICINOT_03001Not Available+722 - 108713679.3
atp-dependent clp protease atp-binding subunit clpaNEICINOT_03002Not Available-1145 - 343684464.2
atp-dependent clp protease adaptor protein clpsNEICINOT_03003Not Available-3438 - 374011325.8
hypothetical proteinNEICINOT_03004Not Available+3744 - 39236823.51
cold-shock dna-binding domain proteinNEICINOT_03005Not Available+3951 - 41938861.79
hypothetical proteinNEICINOT_03006Not Available+4241 - 44417268.06
tldd/pmba family proteinNEICINOT_03008Not Available-4519 - 585048046.0
hypothetical proteinNEICINOT_03007Not Available+5840 - 60106634.2
hypothetical proteinNEICINOT_03009Not Available+6003 - 651519204.0

Displaying genes 1 – 10 of 2191 in total

Metabolites

497 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002482,3-dihydroxy-3-methylbutanoateC5H10O4Chemical structure of 2,3-dihydroxy-3-methylbutanoate1756-18-9
Average134.1305Da
Monoisotopic134.0579088Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 497 metabolites