Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema paraluiscuniculi |
| Strain | Cuniculi A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
267178 bp
Thymine Count
268508 bp
Guanine Count
301110 bp
Cytosine Count
296594 bp
Genome Length
1133390 bp
Protein-coding Genes
979 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration protein ruva | TPCCA_RS02660 | O83554 | Negative | 582465 - 583148 | 24462.4 |
| endonuclease/exonuclease/phosphatase family protein | TPCCA_RS02665 | Not Available | Negative | 583190 - 585064 | 68297.8 |
| galactose abc transporter substrate-binding protein | TPCCA_RS02670 | P36949 | Negative | 585089 - 586120 | 37306.9 |
| s1c family serine protease | TPCCA_RS02675 | O06291 | Negative | 586135 - 587850 | 62717.6 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | TPCCA_RS02680 | O83558 | Negative | 587847 - 588977 | 38869.8 |
| upf0164 family protein | TPCCA_RS02685 | O83559 | Positive | 589117 - 590430 | 46493.8 |
| atp-dependent clp protease atp-binding subunit | TPCCA_RS02690 | Q54316 | Positive | 590580 - 593024 | 91600.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | TPCCA_RS02695 | O83561 | Negative | 593065 - 594552 | 53917.4 |
| phosphatase pap2 family protein | TPCCA_RS02700 | Not Available | Negative | 594556 - 595644 | 38650.5 |
| hypothetical protein | TPCCA_RS02705 | O83563 | Negative | 595657 - 596190 | 20173.0 |
Pathways
36 pathways
