Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema paraluiscuniculi |
| Strain | Cuniculi A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Yes |
Gene Summary
Adenine Count
267178 bp
Thymine Count
268508 bp
Guanine Count
301110 bp
Cytosine Count
296594 bp
Genome Length
1133390 bp
Protein-coding Genes
979 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii caax prenyl endopeptidase rce1 family protein | TPCCA_RS01640 | O83355 | Negative | 354380 - 354919 | 19072.3 |
| comec/rec2 family competence protein | TPCCA_RS01645 | Not Available | Positive | 354849 - 356462 | 57882.1 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | TPCCA_RS01650 | O83357 | Positive | 356443 - 357300 | 32291.6 |
| hypothetical protein | TPCCA_RS01655 | O83358 | Positive | 357318 - 357806 | 18414.3 |
| rlua family pseudouridine synthase | TPCCA_RS01660 | Q45480 | Positive | 357818 - 358813 | 37690.3 |
| folylpolyglutamate synthase/dihydrofolate synthase family protein | TPCCA_RS01665 | Q05865 | Negative | 358799 - 360271 | 54671.2 |
| udp-n-acetylmuramate--l-alanine ligase | TPCCA_RS01670 | O83361 | Positive | 360290 - 361735 | 53666.2 |
| (d)cmp kinase | TPCCA_RS01675 | O83362 | Positive | 361856 - 362416 | 20703.1 |
| a/g-specific adenine glycosylase | TPCCA_RS01680 | P83847 | Positive | 362410 - 363243 | 31733.1 |
| transcription-repair coupling factor | TPCCA_RS01685 | O51568 | Negative | 363248 - 366670 | 129960.0 |
Pathways
36 pathways
