Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system, cell cycle sensor histidine kinase plec | SAMN05421512_102338 | Not Available | Positive | 951038 - 953395 | 85462.1 |
| transcriptional regulator, arsr family | SAMN05421512_102339 | Not Available | Positive | 953570 - 953917 | 12738.2 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN05421512_102340 | Not Available | Positive | 953907 - 954383 | 17936.2 |
| glutamate-ammonia-ligase adenylyltransferase | SAMN05421512_102341 | Not Available | Negative | 954453 - 957461 | 109318.0 |
| hypothetical protein | SAMN05421512_102342 | Not Available | Negative | 957501 - 958931 | 51345.8 |
| two component transcriptional regulator, winged helix family | SAMN05421512_102343 | Not Available | Negative | 958928 - 959671 | 27809.0 |
| serine protease do | SAMN05421512_102344 | Not Available | Negative | 959940 - 961478 | 53552.1 |
| putative redox protein | SAMN05421512_102345 | Not Available | Negative | 961663 - 962901 | 43997.1 |
| cytochrome c-type biogenesis protein ccmh | SAMN05421512_102346 | Not Available | Negative | 963002 - 963493 | 17928.0 |
| cytochrome c-type biogenesis protein ccmf | SAMN05421512_102347 | Not Available | Negative | 963493 - 965481 | 71016.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
