Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted glycosyl transferase | SAMN05421512_102328 | Not Available | Positive | 936188 - 937342 | 41657.9 |
| hypothetical protein | SAMN05421512_102329 | Not Available | Positive | 937339 - 938148 | 30578.5 |
| methyltransferase domain-containing protein | SAMN05421512_102330 | Not Available | Negative | 938129 - 938722 | 21697.8 |
| peptide/nickel transport system permease protein | SAMN05421512_102331 | Not Available | Negative | 938813 - 939973 | 43210.0 |
| peptide/nickel transport system permease protein | SAMN05421512_102332 | Not Available | Negative | 939973 - 940992 | 37172.4 |
| peptide/nickel transport system substrate-binding protein | SAMN05421512_102333 | Not Available | Negative | 941032 - 942930 | 72023.0 |
| peptide/nickel transport system atp-binding protein | SAMN05421512_102334 | Not Available | Negative | 942927 - 944819 | 68858.8 |
| adenylate cyclase | SAMN05421512_102335 | Not Available | Negative | 945018 - 946925 | 68452.3 |
| alpha/beta hydrolase fold | SAMN05421512_102336 | Not Available | Positive | 947185 - 948012 | 30202.2 |
| aminopeptidase n | SAMN05421512_102337 | Not Available | Positive | 948138 - 950783 | 97202.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
