Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anthranilate synthase, component i | SAMN05421512_102298 | Not Available | Positive | 901697 - 903883 | 80009.0 |
| transcriptional regulator, hxlr family | SAMN05421512_102299 | Not Available | Negative | 903936 - 904325 | 14128.4 |
| glutathione s-transferase | SAMN05421512_102300 | Not Available | Positive | 904554 - 905168 | 22045.1 |
| putative lumazine-binding | SAMN05421512_102301 | Not Available | Positive | 905253 - 905654 | 14429.0 |
| 4-oxalocrotonate tautomerase | SAMN05421512_102302 | Not Available | Positive | 905671 - 905889 | 8013.65 |
| peptidoglycan/lps o-acetylase oafa/yrhl, contains acyltransferase and sgnh-hydrolase domains | SAMN05421512_102303 | Not Available | Negative | 905905 - 907866 | 69355.5 |
| nitroreductase | SAMN05421512_102304 | Not Available | Negative | 907982 - 908653 | 24856.5 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421512_102305 | Not Available | Negative | 908748 - 909197 | 15744.0 |
| 2-aminobenzoate-coa ligase | SAMN05421512_102306 | Not Available | Negative | 909234 - 910886 | 59398.3 |
| acyl-coa dehydrogenase | SAMN05421512_102307 | Not Available | Negative | 910941 - 912140 | 42075.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
