Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-3-phosphoglycerate dehydrogenase | SAMN05421512_102288 | Not Available | Negative | 890258 - 891502 | 44468.6 |
| n-formylglutamate amidohydrolase | SAMN05421512_102289 | Not Available | Negative | 891584 - 892465 | 32124.1 |
| peptide/nickel transport system atp-binding protein | SAMN05421512_102290 | Not Available | Negative | 892469 - 893467 | 36350.0 |
| peptide/nickel transport system atp-binding protein | SAMN05421512_102291 | Not Available | Negative | 893464 - 894462 | 35717.3 |
| peptide/nickel transport system permease protein | SAMN05421512_102292 | Not Available | Negative | 894470 - 895393 | 32666.7 |
| peptide/nickel transport system permease protein | SAMN05421512_102293 | Not Available | Negative | 895405 - 896382 | 35835.6 |
| peptide/nickel transport system substrate-binding protein | SAMN05421512_102294 | Not Available | Negative | 896538 - 898130 | 57319.8 |
| transcriptional regulator, lysr family | SAMN05421512_102295 | Not Available | Positive | 898307 - 899269 | 35453.5 |
| acetylornithine deacetylase | SAMN05421512_102296 | Not Available | Positive | 899295 - 900461 | 41653.7 |
| succinylglutamate desuccinylase | SAMN05421512_102297 | Not Available | Positive | 900500 - 901459 | 34621.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
