Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter solute receptor, taxi family | SAMN05421512_102277 | Not Available | Negative | 879081 - 880034 | 33321.6 |
| peptide/nickel transport system permease protein | SAMN05421512_102278 | Not Available | Positive | 880184 - 881233 | 37573.1 |
| peptide/nickel transport system permease protein | SAMN05421512_102279 | Not Available | Positive | 881237 - 882082 | 29101.7 |
| peptide/nickel transport system atp-binding protein | SAMN05421512_102280 | Not Available | Positive | 882079 - 883728 | 59300.4 |
| fructokinase | SAMN05421512_102281 | Not Available | Positive | 883730 - 884650 | 32814.8 |
| polyisoprenoid-binding protein ycei | SAMN05421512_102282 | Not Available | Positive | 884759 - 885361 | 21656.5 |
| methyl-accepting chemotaxis sensory transducer with cache sensor | SAMN05421512_102283 | Not Available | Positive | 885565 - 887619 | 71736.5 |
| (3s)-malyl-coa thioesterase | SAMN05421512_102284 | Not Available | Positive | 887787 - 888191 | 14669.6 |
| hypothetical protein | SAMN05421512_102285 | Not Available | Negative | 888149 - 888523 | 13285.2 |
| nitrate/nitrite transporter nark | SAMN05421512_102287 | Not Available | Negative | 888769 - 890031 | 43796.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
