Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoquinoline 1-oxidoreductase, beta subunit | SAMN05421512_102267 | Not Available | Negative | 865278 - 867500 | 78872.8 |
| isoquinoline 1-oxidoreductase, alpha subunit | SAMN05421512_102268 | Not Available | Negative | 867505 - 867963 | 16227.4 |
| transcriptional regulator, lysr family | SAMN05421512_102269 | Not Available | Positive | 868142 - 869191 | 37915.9 |
| arylsulfatase a | SAMN05421512_102270 | Not Available | Negative | 869203 - 870759 | 57328.4 |
| hypothetical protein | SAMN05421512_102271 | Not Available | Positive | 870915 - 871985 | 40974.5 |
| hypothetical protein | SAMN05421512_102272 | Not Available | Positive | 872206 - 873132 | 33865.2 |
| hypothetical protein | SAMN05421512_102273 | Not Available | Negative | 873110 - 874087 | 34391.2 |
| succinyl-diaminopimelate desuccinylase | SAMN05421512_102274 | Not Available | Positive | 874228 - 875499 | 46455.7 |
| peptide/nickel transport system substrate-binding protein | SAMN05421512_102275 | Not Available | Positive | 875585 - 877090 | 54762.8 |
| trap transporter, 4tm/12tm fusion protein | SAMN05421512_102276 | Not Available | Negative | 877176 - 878933 | 60262.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
