Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine transport system permease protein | SAMN05421512_102257 | Not Available | Positive | 853573 - 854877 | 47770.7 |
| putative spermidine/putrescine transport system permease protein | SAMN05421512_102258 | Not Available | Positive | 854892 - 855746 | 30842.3 |
| sarcosine oxidase, gamma subunit family, heterotetrameric form | SAMN05421512_102259 | Not Available | Negative | 855885 - 856547 | 23043.2 |
| n-methylglutamate dehydrogenase subunit c | SAMN05421512_102260 | Not Available | Negative | 856540 - 859530 | 105544.0 |
| n-methylglutamate dehydrogenase subunit b | SAMN05421512_102261 | Not Available | Negative | 859527 - 859820 | 10659.5 |
| n-methylglutamate dehydrogenase subunit a precursor | SAMN05421512_102262 | Not Available | Negative | 859835 - 861094 | 45964.2 |
| lysr family transcriptional regulator, glycine cleavage system transcriptional activator | SAMN05421512_102263 | Not Available | Negative | 861233 - 862267 | 37436.1 |
| alcohol dehydrogenase, class iv | SAMN05421512_102264 | Not Available | Negative | 862288 - 863436 | 39252.4 |
| hypothetical protein | SAMN05421512_102265 | Not Available | Positive | 863747 - 864616 | 30565.8 |
| hypothetical protein | SAMN05421512_102266 | Not Available | Positive | 864613 - 865194 | 21664.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
