Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421512_102247 | Not Available | Negative | 840542 - 841450 | 32841.1 |
| adenylate kinase | SAMN05421512_102248 | Not Available | Positive | 841647 - 842210 | 20765.6 |
| nucleotidyl transferase abieii toxin, type iv ta system | SAMN05421512_102249 | Not Available | Negative | 842218 - 843135 | 34162.6 |
| transcriptional regulator with abiei antitoxin n-terminal domain | SAMN05421512_102250 | Not Available | Negative | 843122 - 843907 | 29885.1 |
| hypothetical protein | SAMN05421512_102251 | Not Available | Negative | 844056 - 844814 | 27478.2 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN05421512_102252 | Not Available | Negative | 844912 - 845925 | 35058.9 |
| glycine cleavage system t protein (aminomethyltransferase) | SAMN05421512_102253 | Not Available | Negative | 846114 - 848675 | 94914.4 |
| trimethylamine---corrinoid protein co-methyltransferase | SAMN05421512_102254 | Not Available | Positive | 848958 - 850499 | 55240.7 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05421512_102255 | Not Available | Positive | 850984 - 852078 | 40222.0 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05421512_102256 | Not Available | Positive | 852176 - 853276 | 40569.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
