Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, lysr family | SAMN05421512_102237 | Not Available | Negative | 830838 - 831695 | 31505.8 |
| nad(p)h dehydrogenase (quinone) | SAMN05421512_102238 | Not Available | Positive | 831787 - 832533 | 27154.0 |
| methylglyoxal synthase | SAMN05421512_102239 | Not Available | Negative | 832547 - 833614 | 37291.1 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN05421512_102240 | Not Available | Positive | 833791 - 834498 | 25550.1 |
| protein of unknown function | SAMN05421512_102241 | Not Available | Positive | 834502 - 835170 | 23869.8 |
| chloramphenicol o-acetyltransferase type b | SAMN05421512_102242 | Not Available | Positive | 835359 - 836006 | 23988.6 |
| virulence factor | SAMN05421512_102243 | Not Available | Positive | 836270 - 836614 | 12148.2 |
| methylenetetrahydrofolate reductase (nadph) | SAMN05421512_102244 | Not Available | Positive | 836611 - 837507 | 32350.0 |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | SAMN05421512_102245 | Not Available | Positive | 837504 - 838460 | 33509.4 |
| uncharacterized 2fe-2 and 4fe-4s clusters-containing protein, contains duf4445 domain | SAMN05421512_102246 | Not Available | Positive | 838493 - 840532 | 71989.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
