Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine synthase a | SAMN05421512_102217 | Not Available | Positive | 811379 - 812419 | 36926.2 |
| cardiolipin synthase | SAMN05421512_102218 | Not Available | Positive | 812556 - 814007 | 54395.5 |
| misacylated trna(ala) deacylase | SAMN05421512_102219 | Not Available | Positive | 814107 - 814820 | 25929.0 |
| thiosulfate/3-mercaptopyruvate sulfurtransferase | SAMN05421512_102220 | Not Available | Positive | 814859 - 815701 | 29822.5 |
| formate-tetrahydrofolate ligase | SAMN05421512_102221 | Not Available | Positive | 815856 - 817526 | 59010.1 |
| acetyltransferase (gnat) family protein | SAMN05421512_102222 | Not Available | Negative | 818087 - 818617 | 20011.9 |
| major facilitator superfamily protein | SAMN05421512_102223 | Not Available | Negative | 818637 - 820097 | 49468.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421512_102224 | Not Available | Negative | 820094 - 820984 | 32375.7 |
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN05421512_102225 | Not Available | Negative | 820986 - 821414 | 16218.3 |
| threonine/homoserine/homoserine lactone efflux protein | SAMN05421512_102226 | Not Available | Negative | 821516 - 822184 | 23851.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
