Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex transport system permease protein | SAMN05421512_102207 | Not Available | Positive | 800031 - 801062 | 34606.7 |
| iron complex transport system atp-binding protein | SAMN05421512_102208 | Not Available | Positive | 801059 - 801862 | 27688.5 |
| hypothetical protein | SAMN05421512_102209 | Not Available | Positive | 802195 - 802878 | 24572.9 |
| deoxyribodipyrimidine photo-lyase | SAMN05421512_102210 | Not Available | Positive | 803115 - 804584 | 55191.2 |
| hypothetical protein | SAMN05421512_102211 | Not Available | Positive | 804601 - 805905 | 48413.2 |
| hypothetical protein | SAMN05421512_102212 | Not Available | Positive | 805902 - 806738 | 30640.1 |
| cyclopropane-fatty-acyl-phospholipid synthase | SAMN05421512_102213 | Not Available | Positive | 806773 - 808002 | 47037.0 |
| na+/melibiose symporter | SAMN05421512_102214 | Not Available | Positive | 808006 - 809352 | 46448.8 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN05421512_102215 | Not Available | Negative | 809362 - 810183 | 28851.7 |
| anti-ecfsigma factor, chrr | SAMN05421512_102216 | Not Available | Negative | 810372 - 811016 | 23263.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
