Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobaltochelatase cobn subunit | SAMN05421512_102185 | Not Available | Negative | 780456 - 784229 | 134692.0 |
| cobalamin biosynthesis protein cobw | SAMN05421512_102186 | Not Available | Negative | 784266 - 785402 | 40240.4 |
| adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferase | SAMN05421512_102188 | Not Available | Negative | 785399 - 785986 | 20905.0 |
| Trna-asn | Not Available | Not Available | Positive | 786547 - 786621 | Not Available |
| hypothetical protein | SAMN05421512_102191 | Not Available | Negative | 786697 - 787851 | 42548.8 |
| tspo and mbr related proteins | SAMN05421512_102192 | Not Available | Negative | 787971 - 788444 | 17659.1 |
| protein of unknown function | SAMN05421512_102193 | Not Available | Negative | 788536 - 788757 | 8053.68 |
| cupin domain-containing protein | SAMN05421512_102194 | Not Available | Negative | 788773 - 789153 | 13606.0 |
| dna-binding transcriptional regulator, marr family | SAMN05421512_102195 | Not Available | Positive | 789298 - 789801 | 18090.8 |
| catechol 2,3-dioxygenase | SAMN05421512_102196 | Not Available | Negative | 789826 - 790722 | 30837.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
