Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator of acetoin/glycerol metabolism | SAMN05421512_102175 | Not Available | Positive | 767222 - 769159 | 69858.0 |
| putative flavoprotein involved in k+ transport | SAMN05421512_102176 | Not Available | Positive | 769364 - 771163 | 66751.4 |
| hypothetical protein | SAMN05421512_102177 | Not Available | Positive | 771476 - 772249 | 27317.7 |
| Trna-cys | Not Available | Not Available | Positive | 772390 - 772463 | Not Available |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421512_102179 | Not Available | Positive | 772812 - 775454 | 95572.1 |
| l-threonine o-3-phosphate decarboxylase | SAMN05421512_102180 | Not Available | Positive | 775570 - 776589 | 35701.2 |
| adenosylcobinamide-phosphate synthase | SAMN05421512_102181 | Not Available | Positive | 776594 - 777577 | 34453.0 |
| adenosylcobyric acid synthase (glutamine-hydrolysing) | SAMN05421512_102182 | Not Available | Negative | 777584 - 779026 | 50335.2 |
| protein of unknown function | SAMN05421512_102183 | Not Available | Negative | 779064 - 779813 | 28266.0 |
| cob(i)alamin adenosyltransferase | SAMN05421512_102184 | Not Available | Negative | 779827 - 780459 | 23959.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
