Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| autotransporter secretion outer membrane protein tama | SAMN05421512_102165 | Not Available | Positive | 751860 - 753827 | 70203.0 |
| translocation and assembly module tamb | SAMN05421512_102166 | Not Available | Positive | 754088 - 758131 | 136931.0 |
| (2r)-3-sulfolactate dehydrogenase (nadp+) | SAMN05421512_102167 | Not Available | Negative | 758352 - 759380 | 34572.3 |
| gntr family transcriptional regulator | SAMN05421512_102168 | Not Available | Positive | 759675 - 760391 | 26359.8 |
| succinate semialdehyde dehydrogenase | SAMN05421512_102169 | Not Available | Positive | 760471 - 761925 | 51328.6 |
| dna-binding transcriptional regulator, lysr family | SAMN05421512_102170 | Not Available | Negative | 761985 - 762920 | 34016.5 |
| ohcu decarboxylase | SAMN05421512_102171 | Not Available | Positive | 763034 - 764590 | 55387.4 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421512_102172 | Not Available | Positive | 764595 - 765080 | 17233.6 |
| trap transporter, dctm subunit | SAMN05421512_102173 | Not Available | Positive | 765077 - 766357 | 44816.2 |
| asp/glu/hydantoin racemase | SAMN05421512_102174 | Not Available | Positive | 766357 - 767112 | 26005.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
