Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| capsular polysaccharide transport system permease protein | SAMN05421512_102145 | Not Available | Positive | 719714 - 720499 | 28875.1 |
| capsular polysaccharide transport system atp-binding protein | SAMN05421512_102146 | Not Available | Positive | 720496 - 721149 | 24892.3 |
| capsular polysaccharide transport system permease protein | SAMN05421512_102147 | Not Available | Positive | 721190 - 722461 | 47338.7 |
| abc-2 type transport system permease protein/capsular polysaccharide transport system permease protein | SAMN05421512_102148 | Not Available | Positive | 722490 - 723851 | 49760.3 |
| hypothetical protein | SAMN05421512_102149 | Not Available | Positive | 723879 - 724970 | 40791.9 |
| methyltransferase domain-containing protein | SAMN05421512_102150 | Not Available | Negative | 725647 - 726492 | 31796.1 |
| nitt/taut family transport system permease protein | SAMN05421512_102151 | Not Available | Negative | 726608 - 727372 | 27440.6 |
| nitt/taut family transport system atp-binding protein | SAMN05421512_102152 | Not Available | Negative | 727369 - 728157 | 28740.0 |
| nitt/taut family transport system substrate-binding protein | SAMN05421512_102153 | Not Available | Negative | 728323 - 729333 | 36087.4 |
| adenylylsulfate kinase /sulfate adenylyltransferase subunit 1 | SAMN05421512_102154 | Not Available | Negative | 729509 - 731395 | 69045.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
