Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase subunit 2 | SAMN05421512_102135 | Not Available | Negative | 710557 - 711501 | 36012.3 |
| hypothetical protein | SAMN05421512_102136 | Not Available | Negative | 711501 - 711704 | 6898.77 |
| methyltransferase domain-containing protein | SAMN05421512_102137 | Not Available | Negative | 711794 - 712540 | 27441.9 |
| methyltransferase domain-containing protein | SAMN05421512_102138 | Not Available | Negative | 712540 - 713394 | 31869.0 |
| rhamnan synthesis protein f | SAMN05421512_102139 | Not Available | Negative | 713412 - 714734 | 51487.6 |
| glucose-1-phosphate thymidylyltransferase | SAMN05421512_102140 | Not Available | Negative | 714746 - 715615 | 31941.5 |
| dtdp-4-dehydrorhamnose reductase | SAMN05421512_102141 | Not Available | Negative | 715612 - 716487 | 31243.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN05421512_102142 | Not Available | Negative | 716496 - 717557 | 39172.8 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05421512_102143 | Not Available | Negative | 717752 - 718309 | 21002.8 |
| l-2-hydroxyglutarate oxidase lhgo | SAMN05421512_102144 | Not Available | Positive | 718513 - 719607 | 38220.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
