Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitric oxide reductase nord protein | SAMN05421512_102125 | Not Available | Positive | 693094 - 695007 | 70611.0 |
| hypothetical protein | SAMN05421512_102126 | Not Available | Negative | 695011 - 696075 | 38329.4 |
| tetratricopeptide repeat-containing protein | SAMN05421512_102127 | Not Available | Negative | 696072 - 697262 | 43600.5 |
| hypothetical protein | SAMN05421512_102128 | Not Available | Negative | 697357 - 698139 | 26803.4 |
| methyltransferase domain-containing protein | SAMN05421512_102129 | Not Available | Positive | 698884 - 699288 | 15364.1 |
| polysaccharide pyruvyl transferase | SAMN05421512_102130 | Not Available | Positive | 699360 - 700448 | 41490.9 |
| haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)e | SAMN05421512_102131 | Not Available | Negative | 700445 - 702409 | 71239.5 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05421512_102132 | Not Available | Negative | 702435 - 707495 | 182063.0 |
| udp-glucose 4-epimerase | SAMN05421512_102133 | Not Available | Negative | 707523 - 708512 | 36100.5 |
| bifunctional enzyme cysn/cysc | SAMN05421512_102134 | Not Available | Negative | 708653 - 710554 | 69700.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
