Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-octaprenyl-4hydroxybenzoate decarboxylase | SAMN05421512_102115 | Not Available | Negative | 684665 - 686158 | 54000.4 |
| predicted lipid carrier protein yhbt, contains scp2 domain | SAMN05421512_102116 | Not Available | Positive | 686249 - 686842 | 20891.6 |
| putative protease | SAMN05421512_102117 | Not Available | Positive | 686839 - 687819 | 34556.2 |
| collagenase-like protease, prtc family | SAMN05421512_102118 | Not Available | Positive | 687824 - 688750 | 33346.0 |
| molybdopterin adenylyltransferase | SAMN05421512_102119 | Not Available | Negative | 688722 - 689270 | 19033.0 |
| cytochrome c oxidase subunit iv | SAMN05421512_102120 | Not Available | Negative | 689309 - 689566 | 8517.7 |
| nitric oxide reductase nore protein | SAMN05421512_102121 | Not Available | Negative | 689566 - 690147 | 20436.1 |
| nitric oxide reductase, norc subunit apoprotein | SAMN05421512_102122 | Not Available | Positive | 690323 - 690805 | 17782.8 |
| nitric oxide reductase, norb subunit apoprotein | SAMN05421512_102123 | Not Available | Positive | 690819 - 692177 | 50724.0 |
| nitric oxide reductase norq protein | SAMN05421512_102124 | Not Available | Positive | 692271 - 693089 | 29262.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
