Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucyl-trna synthetase | SAMN05421512_102105 | Not Available | Negative | 666757 - 669894 | 119343.0 |
| udp-n-acetyl-d-glucosamine dehydrogenase | SAMN05421512_102106 | Not Available | Negative | 670036 - 671361 | 47843.5 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN05421512_102107 | Not Available | Negative | 671509 - 672423 | 31854.4 |
| hemolysin-type calcium-binding repeat-containing protein | SAMN05421512_102108 | Not Available | Negative | 672909 - 675895 | 100862.0 |
| serralysin | SAMN05421512_102109 | Not Available | Negative | 676214 - 679099 | 100102.0 |
| hypothetical protein | SAMN05421512_102110 | Not Available | Negative | 679175 - 679666 | 17343.7 |
| mannose-6-phosphate isomerase, type 3 | SAMN05421512_102111 | Not Available | Negative | 679771 - 680949 | 43175.0 |
| phosphomannomutase / phosphoglucomutase | SAMN05421512_102112 | Not Available | Negative | 680984 - 682480 | 54647.5 |
| mannose-1-phosphate guanylyltransferase/mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase | SAMN05421512_102113 | Not Available | Negative | 682540 - 683958 | 51591.4 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | SAMN05421512_102114 | Not Available | Negative | 684087 - 684668 | 19964.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
