Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase | SAMN05421512_10285 | Not Available | Negative | 641838 - 642695 | 29574.4 |
| phenylacetic acid degradation protein paan | SAMN05421512_10286 | Not Available | Positive | 643034 - 644695 | 58017.9 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05421512_10287 | Not Available | Positive | 644794 - 645948 | 40345.5 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05421512_10288 | Not Available | Positive | 646075 - 646947 | 29597.4 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05421512_10289 | Not Available | Positive | 646950 - 647897 | 32918.4 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05421512_10290 | Not Available | Positive | 647894 - 648694 | 28348.4 |
| amino acid/amide abc transporter atp-binding protein 2, haat family | SAMN05421512_10291 | Not Available | Positive | 648681 - 649403 | 25746.2 |
| cytochrome c | SAMN05421512_10292 | Not Available | Negative | 649417 - 649836 | 14372.4 |
| cu(i)-responsive transcriptional regulator | SAMN05421512_10293 | Not Available | Negative | 649833 - 650246 | 15263.2 |
| saccharopine dehydrogenase, nadp-dependent | SAMN05421512_10294 | Not Available | Positive | 650516 - 651646 | 40256.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
