Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative urate catabolism protein | SAMN05421512_10275 | Not Available | Negative | 629605 - 630516 | 34593.4 |
| hypothetical protein | SAMN05421512_10276 | Not Available | Negative | 630611 - 631012 | 14062.5 |
| transcriptional regulator, padr family | SAMN05421512_10277 | Not Available | Positive | 631446 - 632000 | 20432.4 |
| membrane fusion protein, multidrug efflux system | SAMN05421512_10278 | Not Available | Positive | 632026 - 633129 | 38638.4 |
| multidrug efflux pump | SAMN05421512_10279 | Not Available | Positive | 633126 - 636779 | 131328.0 |
| hypothetical protein | SAMN05421512_10280 | Not Available | Negative | 636867 - 637508 | 22612.3 |
| nucleoid-associated protein ygau, contains bon and lysm domains | SAMN05421512_10281 | Not Available | Positive | 637704 - 639248 | 52313.0 |
| transcriptional regulator, tetr family | SAMN05421512_10282 | Not Available | Negative | 639293 - 639895 | 22429.9 |
| phenylacetate-coa ligase | SAMN05421512_10283 | Not Available | Negative | 639972 - 641282 | 48354.1 |
| acyl-coa thioesterase | SAMN05421512_10284 | Not Available | Negative | 641371 - 641835 | 16233.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
