Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421512_10265 | Not Available | Negative | 620816 - 622327 | 55393.1 |
| alcohol dehydrogenase, propanol-preferring | SAMN05421512_10266 | Not Available | Positive | 622510 - 623529 | 35082.5 |
| predicted atpase | SAMN05421512_10267 | Not Available | Negative | 623540 - 624085 | 19915.9 |
| hypothetical protein | SAMN05421512_10268 | Not Available | Negative | 624189 - 624521 | 11993.4 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paae | SAMN05421512_10269 | Not Available | Negative | 624658 - 625737 | 39043.6 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paad | SAMN05421512_10270 | Not Available | Negative | 625797 - 626318 | 18849.5 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paac | SAMN05421512_10271 | Not Available | Negative | 626315 - 627082 | 28641.5 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paab | SAMN05421512_10272 | Not Available | Negative | 627097 - 627384 | 10724.7 |
| ring-1,2-phenylacetyl-coa epoxidase subunit paaa | SAMN05421512_10273 | Not Available | Negative | 627496 - 628497 | 38099.9 |
| transcriptional regulator, paax family | SAMN05421512_10274 | Not Available | Negative | 628662 - 629627 | 33799.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
