Stappia indica

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Stappiaceae

Genus

Stappia

Description

Stappia indica is a Gram-negative, rod-shaped bacterium that thrives optimally at a temperature of 32.0°C. This microbe is characterized by its distinct morphological and physiological traits, which align with the broader characteristics typically attributed to the genus Stappia. As a Gram-negative organism, Stappia indica possesses a thin peptidoglycan layer surrounded by an outer membrane, which contributes to its structural integrity and influences its interactions with the environment. Given its optimal growth temperature, Stappia indica may be well-suited to mesophilic environments, potentially indicating a niche within temperate ecosystems where the ambient temperature fluctuates around this range. While specific ecological roles and interactions are not detailed, the thermal preference suggests that Stappia indica could play a role in nutrient cycling or organic matter degradation in habitats that experience moderate temperatures. Furthermore, the rod shape of Stappia indica may confer advantages in motility and surface adherence, which are essential traits for colonization and interaction with various substrates. This morphology may also facilitate the microbe's ability to thrive in diverse environments, potentially contributing to a dynamic ecological role within its habitat. Understanding the physiological and environmental preferences of Stappia indica can provide insights into its potential functional contributions to microbial communities and ecosystem processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyStappiaceae
GenusStappia
SpeciesStappia indica
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature32
Temperature rangemesophilic
HabitatMarine
Biotic relationshipNot Available
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Stappia indica strain USBA 352 genome assembly, contig:

Gene Summary

Adenine Count

825960 bp

Thymine Count

819759 bp

Guanine Count

1662501 bp

Cytosine Count

1703840 bp

Genome Length

5015470 bp

Protein-coding Genes

4471 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclase (ggdef) domain-containing proteinSAMN05421512_10265Not AvailableNegative620816 - 62232755393.1
alcohol dehydrogenase, propanol-preferringSAMN05421512_10266Not AvailablePositive622510 - 62352935082.5
predicted atpaseSAMN05421512_10267Not AvailableNegative623540 - 62408519915.9
hypothetical proteinSAMN05421512_10268Not AvailableNegative624189 - 62452111993.4
ring-1,2-phenylacetyl-coa epoxidase subunit paaeSAMN05421512_10269Not AvailableNegative624658 - 62573739043.6
ring-1,2-phenylacetyl-coa epoxidase subunit paadSAMN05421512_10270Not AvailableNegative625797 - 62631818849.5
ring-1,2-phenylacetyl-coa epoxidase subunit paacSAMN05421512_10271Not AvailableNegative626315 - 62708228641.5
ring-1,2-phenylacetyl-coa epoxidase subunit paabSAMN05421512_10272Not AvailableNegative627097 - 62738410724.7
ring-1,2-phenylacetyl-coa epoxidase subunit paaaSAMN05421512_10273Not AvailableNegative627496 - 62849738099.9
transcriptional regulator, paax familySAMN05421512_10274Not AvailableNegative628662 - 62962733799.6

Displaying genes 711 – 720 of 4626 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial peritonitisCausesPMC8271035

Displaying health effects 1 – 1 of 1 in total