Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein | SAMN05421512_10255 | Not Available | Positive | 608739 - 609356 | 20110.9 |
| uncharacterized membrane protein yhah, duf805 family | SAMN05421512_10256 | Not Available | Negative | 609611 - 610213 | 21455.2 |
| 5-deoxyglucuronate isomerase | SAMN05421512_10257 | Not Available | Negative | 610352 - 611158 | 29696.8 |
| 2-keto-myo-inositol dehydratase | SAMN05421512_10258 | Not Available | Negative | 611205 - 612104 | 32216.2 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase | SAMN05421512_10259 | Not Available | Negative | 612141 - 613976 | 65453.0 |
| 5-dehydro-2-deoxygluconokinase | SAMN05421512_10260 | Not Available | Negative | 613973 - 615910 | 69662.9 |
| atp-dependent rna helicase rhle | SAMN05421512_10261 | Not Available | Positive | 616608 - 618044 | 51698.8 |
| ureidoglycolate lyase | SAMN05421512_10262 | Not Available | Negative | 618144 - 618992 | 29677.5 |
| fic family protein | SAMN05421512_10263 | Not Available | Negative | 619080 - 620207 | 41430.4 |
| glyoxalase superfamily enzyme, possibly 3-demethylubiquinone-9 3-methyltransferase | SAMN05421512_10264 | Not Available | Positive | 620404 - 620796 | 14362.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
