Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol 2-dehydrogenase | SAMN05421512_10244 | Not Available | Negative | 595969 - 597546 | 56525.3 |
| d-sorbitol dehydrogenase (acceptor) | SAMN05421512_10245 | Not Available | Negative | 597580 - 598353 | 26804.1 |
| sorbitol abc transporter atp-binding protein /mannitol abc transporter atp-binding protein | SAMN05421512_10246 | Not Available | Negative | 598350 - 599351 | 36378.0 |
| sorbitol abc transporter membrane protein /mannitol abc transporter membrane protein | SAMN05421512_10247 | Not Available | Negative | 599363 - 600193 | 30358.0 |
| sorbitol/mannitol transport system permease protein | SAMN05421512_10248 | Not Available | Negative | 600196 - 601068 | 31479.7 |
| sorbitol/mannitol transport system substrate-binding protein | SAMN05421512_10249 | Not Available | Negative | 601160 - 602473 | 47570.4 |
| transcriptional regulator, deor family | SAMN05421512_10250 | Not Available | Negative | 602728 - 603684 | 34241.3 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05421512_10251 | Not Available | Negative | 603689 - 604456 | 27318.4 |
| betaine/carnitine transporter, bcct family | SAMN05421512_10252 | Not Available | Positive | 605014 - 606654 | 58230.4 |
| cobalt uptake substrate-specific transmembrane region | SAMN05421512_10254 | Not Available | Positive | 607863 - 608546 | 23694.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
