Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative baseplate assembly protein with lysozyme | SAMN05421512_1174 | Not Available | Negative | 4853375 - 4853785 | 15119.2 |
| type vi secretion system, phage-baseplate injector | SAMN05421512_1175 | Not Available | Negative | 4853785 - 4854357 | 20394.0 |
| hypothetical protein | SAMN05421512_1176 | Not Available | Negative | 4854354 - 4855001 | 23241.6 |
| Virion morphogenesis protein | SAMN05421512_1177 | Not Available | Negative | 4855001 - 4855483 | 17300.4 |
| Hypothetical protein | SAMN05421512_1178 | Not Available | Negative | 4855483 - 4855944 | 16569.5 |
| hypothetical protein | SAMN05421512_1179 | Not Available | Negative | 4855993 - 4856688 | 23878.1 |
| Putative capsid protein | SAMN05421512_11710 | Not Available | Negative | 4856844 - 4857803 | 34492.2 |
| Hypothetical protein | SAMN05421512_11711 | Not Available | Negative | 4857830 - 4858207 | 12155.5 |
| I protein | SAMN05421512_11712 | Not Available | Negative | 4858204 - 4859325 | 38767.0 |
| Virion morphogenesis protein | SAMN05421512_11713 | Not Available | Negative | 4859593 - 4860813 | 45791.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
