Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter, dctm subunit | SAMN05421512_10224 | Not Available | Negative | 570239 - 571522 | 44164.8 |
| trap-type c4-dicarboxylate transport system, small permease component | SAMN05421512_10225 | Not Available | Negative | 571519 - 572250 | 25227.7 |
| trap-type c4-dicarboxylate transport system, substrate-binding protein | SAMN05421512_10226 | Not Available | Negative | 572382 - 573563 | 43099.1 |
| dihydroxyacid dehydratase | SAMN05421512_10227 | Not Available | Negative | 574058 - 575731 | 59350.5 |
| transcriptional regulator, lysr family | SAMN05421512_10228 | Not Available | Negative | 576112 - 577164 | 37948.2 |
| l-prolyl-[peptidyl carrier protein] dehydrogenase | SAMN05421512_10229 | Not Available | Positive | 577684 - 578832 | 42175.7 |
| acyl carrier protein | SAMN05421512_10230 | Not Available | Positive | 579163 - 579435 | 9631.31 |
| clorobiocin biosynthesis protein clon6 | SAMN05421512_10231 | Not Available | Positive | 579482 - 581203 | 65364.2 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05421512_10232 | Not Available | Positive | 581344 - 582360 | 35597.5 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05421512_10233 | Not Available | Positive | 582375 - 583385 | 37156.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
