Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421512_10214 | Not Available | Negative | 561006 - 561785 | 27022.6 |
| predicted dna-binding protein with pd1-like dna-binding motif | SAMN05421512_10215 | Not Available | Negative | 561782 - 562243 | 15722.9 |
| hypothetical protein | SAMN05421512_10216 | Not Available | Negative | 562240 - 562812 | 20029.1 |
| fatty-acyl-coa synthase | SAMN05421512_10217 | Not Available | Negative | 562809 - 564419 | 58174.6 |
| acetyl-coa c-acetyltransferase | SAMN05421512_10218 | Not Available | Negative | 564416 - 565585 | 41403.1 |
| transcriptional regulator, asnc family | SAMN05421512_10219 | Not Available | Positive | 565723 - 566184 | 17486.7 |
| Trna-cys | Not Available | Not Available | Positive | 566330 - 566403 | Not Available |
| amino acid adenylation domain-containing protein | SAMN05421512_10221 | Not Available | Negative | 566497 - 568113 | 58463.4 |
| hypothetical protein | SAMN05421512_10222 | Not Available | Negative | 568132 - 569484 | 50814.3 |
| hypothetical protein | SAMN05421512_10223 | Not Available | Negative | 569519 - 570196 | 24212.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
