Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted metal-binding protein | SAMN05421512_1024 | Not Available | Positive | 550559 - 551005 | 15729.6 |
| iron complex transport system atp-binding protein | SAMN05421512_1025 | Not Available | Positive | 551002 - 551883 | 31276.6 |
| iron complex transport system substrate-binding protein | SAMN05421512_1026 | Not Available | Positive | 551949 - 552926 | 35424.5 |
| iron complex transport system permease protein | SAMN05421512_1027 | Not Available | Positive | 552930 - 553907 | 33178.8 |
| transcriptional regulator, asnc family | SAMN05421512_1028 | Not Available | Negative | 553914 - 554381 | 17126.7 |
| hypothetical protein | SAMN05421512_1029 | Not Available | Positive | 554588 - 555739 | 41244.1 |
| branched-chain alpha-keto acid dehydrogenase e1 component | SAMN05421512_10210 | Not Available | Positive | 555806 - 557038 | 44879.1 |
| branched-chain alpha-keto acid dehydrogenase e1 component | SAMN05421512_10211 | Not Available | Positive | 557040 - 558053 | 36946.3 |
| branched-chain alpha-keto acid dehydrogenase e2 component | SAMN05421512_10212 | Not Available | Positive | 558058 - 559389 | 47043.2 |
| dihydrolipoamide dehydrogenase | SAMN05421512_10213 | Not Available | Positive | 559394 - 560782 | 48085.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
