Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, gntr family | SAMN05421512_101492 | Not Available | Positive | 540203 - 540970 | 27880.4 |
| tigr04076 family protein | SAMN05421512_101493 | Not Available | Positive | 540967 - 541347 | 13638.0 |
| predicted oxidoreductase | SAMN05421512_101494 | Not Available | Positive | 541352 - 542413 | 39126.6 |
| hypothetical protein | SAMN05421512_101495 | Not Available | Positive | 542410 - 542853 | 16011.6 |
| branched-chain amino acid transport system substrate-binding protein | SAMN05421512_101496 | Not Available | Positive | 542871 - 544145 | 43666.6 |
| uncharacterized conserved protein, duf849 family | SAMN05421512_101497 | Not Available | Negative | 544240 - 545067 | 29755.7 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN05421512_101498 | Not Available | Negative | 545194 - 547224 | 72779.3 |
| hypothetical protein | SAMN05421512_101499 | Not Available | Negative | 547229 - 547714 | 17757.5 |
| transposase is116/is110/is902 family protein | SAMN05421512_1021 | Not Available | Positive | 548008 - 548354 | 12091.1 |
| gtpase, g3e family | SAMN05421512_1022 | Not Available | Positive | 548937 - 550142 | 44865.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
