Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN05421512_101482 | Not Available | Positive | 529490 - 530437 | 34368.6 |
| peptide/nickel transport system permease protein | SAMN05421512_101483 | Not Available | Positive | 530434 - 531333 | 31585.9 |
| gamma-glutamyltransferase 2. threonine peptidase. merops family t03 | SAMN05421512_101484 | Not Available | Positive | 531383 - 533170 | 64243.6 |
| uncharacterized conserved protein, ntn-hydrolase superfamily | SAMN05421512_101485 | Not Available | Positive | 533186 - 533938 | 26355.5 |
| hypothetical protein | SAMN05421512_101486 | Not Available | Positive | 534004 - 534921 | 33889.8 |
| predicted oxidoreductase | SAMN05421512_101487 | Not Available | Negative | 534940 - 536409 | 53339.4 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05421512_101488 | Not Available | Negative | 536406 - 537407 | 34924.3 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05421512_101489 | Not Available | Negative | 537404 - 538315 | 31210.5 |
| branched-chain amino acid transport system atp-binding protein | SAMN05421512_101490 | Not Available | Negative | 538312 - 539088 | 26622.5 |
| branched-chain amino acid transport system atp-binding protein | SAMN05421512_101491 | Not Available | Negative | 539085 - 539918 | 29337.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
