Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbohydrate abc transporter membrane protein 1, cut1 family | SAMN05421512_101472 | Not Available | Positive | 518096 - 519010 | 34497.6 |
| carbohydrate abc transporter membrane protein 2, cut1 family | SAMN05421512_101473 | Not Available | Positive | 519007 - 519858 | 31784.5 |
| ca-activated chloride channel family protein | SAMN05421512_101474 | Not Available | Negative | 519944 - 521920 | 67179.8 |
| protease inhibitor inh | SAMN05421512_101475 | Not Available | Positive | 522214 - 522861 | 21780.8 |
| transcriptional regulator, arac family | SAMN05421512_101476 | Not Available | Negative | 522902 - 523957 | 39106.6 |
| mosc domain-containing protein yiim | SAMN05421512_101477 | Not Available | Negative | 524081 - 524770 | 25115.6 |
| transcriptional regulator, gntr family | SAMN05421512_101478 | Not Available | Positive | 525051 - 525773 | 27397.6 |
| oligopeptide/dipeptide abc transporter, atp-binding protein, c-terminal domain-containing protein | SAMN05421512_101479 | Not Available | Positive | 525763 - 526788 | 36454.5 |
| peptide/nickel transport system atp-binding protein | SAMN05421512_101480 | Not Available | Positive | 526785 - 527888 | 40625.1 |
| peptide/nickel transport system substrate-binding protein | SAMN05421512_101481 | Not Available | Positive | 527914 - 529425 | 54981.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
