Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | SAMN05421512_101452 | Not Available | Positive | 490000 - 491511 | 55561.1 |
| phosphatidylethanolamine/phosphatidyl-n- methylethanolamine n-methyltransferase | SAMN05421512_101453 | Not Available | Positive | 491511 - 492215 | 26026.9 |
| esterase-like activity of phytase | SAMN05421512_101454 | Not Available | Negative | 492309 - 494480 | 75935.3 |
| methyltransferase domain-containing protein | SAMN05421512_101455 | Not Available | Negative | 494586 - 495407 | 30143.1 |
| hypothetical protein | SAMN05421512_101456 | Not Available | Negative | 495404 - 496294 | 34030.6 |
| hypothetical protein | SAMN05421512_101457 | Not Available | Positive | 496455 - 498362 | 68249.8 |
| hypothetical protein | SAMN05421512_101458 | Not Available | Positive | 498633 - 498932 | 10805.0 |
| carboxymethylenebutenolidase | SAMN05421512_101459 | Not Available | Positive | 499094 - 500014 | 33222.0 |
| hypothetical protein | SAMN05421512_101460 | Not Available | Negative | 500112 - 503786 | 132853.0 |
| hypothetical protein | SAMN05421512_101461 | Not Available | Negative | 503755 - 504702 | 33204.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
