Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421512_113171 | Not Available | Negative | 4522613 - 4523032 | 14632.5 |
| Gp58 | SAMN05421512_113172 | Not Available | Negative | 4523134 - 4523994 | 31601.8 |
| hypothetical protein | SAMN05421512_113173 | Not Available | Positive | 4524151 - 4524870 | 24963.3 |
| hypothetical protein | SAMN05421512_113174 | Not Available | Negative | 4524999 - 4525631 | 22490.6 |
| Attr | Not Available | Not Available | Positive | 4525539 - 4525551 | Not Available |
| hypothetical protein | SAMN05421512_113175 | Not Available | Negative | 4525628 - 4525939 | 11116.2 |
| Minor capsid protein | SAMN05421512_113176 | Not Available | Negative | 4525939 - 4526274 | 11262.4 |
| Putative adsorbtion tail protein | SAMN05421512_1171 | Not Available | Negative | 4850294 - 4851392 | 38321.0 |
| phage tail protein (tail_p2_i) | SAMN05421512_1172 | Not Available | Negative | 4851400 - 4852536 | 39672.1 |
| Baseplate assembly protein | SAMN05421512_1173 | Not Available | Negative | 4852533 - 4853378 | 30289.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
