Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Stappiaceae
Genus
Stappia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Stappiaceae |
| Genus | Stappia |
| Species | Stappia indica |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Marine |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
825960 bp
Thymine Count
819759 bp
Guanine Count
1662501 bp
Cytosine Count
1703840 bp
Genome Length
5015470 bp
Protein-coding Genes
4471 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(a) polymerase | SAMN05421512_101424 | Not Available | Negative | 459550 - 460794 | 43767.5 |
| hypothetical protein | SAMN05421512_101425 | Not Available | Negative | 460821 - 461081 | 9672.26 |
| 8-oxo-dgtp pyrophosphatase mutt, nudix family | SAMN05421512_101426 | Not Available | Negative | 461081 - 461782 | 25412.5 |
| hypothetical protein | SAMN05421512_101427 | Not Available | Negative | 461779 - 462399 | 22745.9 |
| moxr-like atpase | SAMN05421512_101428 | Not Available | Positive | 462605 - 463609 | 36275.8 |
| uncharacterized conserved protein, duf58 family, contains vwf domain | SAMN05421512_101429 | Not Available | Positive | 463616 - 464572 | 35381.0 |
| n-terminal double-transmembrane domain-containing protein | SAMN05421512_101430 | Not Available | Positive | 464569 - 467403 | 100585.0 |
| hypothetical protein | SAMN05421512_101431 | Not Available | Positive | 467414 - 469492 | 74777.9 |
| predicted n-acetyltransferase yhbs | SAMN05421512_101432 | Not Available | Negative | 469563 - 470075 | 17899.0 |
| putative glutathione s-transferase | SAMN05421512_101433 | Not Available | Positive | 470493 - 471470 | 36557.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
